PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01342.1.p
Common NameLOC105969121, MIMGU_mgv1a003939mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 554aa    MW: 59857.4 Da    PI: 6.7001
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01342.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.3e-30299357259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+
  Migut.M01342.1.p 299 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCADDRTILITTYEGTHNHP 357
                       7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-33283359IPR003657WRKY domain
SuperFamilySSF1182905.49E-28291359IPR003657WRKY domain
PROSITE profilePS5081129.562293359IPR003657WRKY domain
SMARTSM007741.2E-36298358IPR003657WRKY domain
PfamPF031068.8E-27300357IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0016036Biological Processcellular response to phosphate starvation
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0080169Biological Processcellular response to boron-containing substance deprivation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    Send to blast
MERGWGLALD NSADQVGFFG NKQVFGDHHH HHRSGTTSSG LIMFPVNSRV REDDDGGAAA  60
SSPPRGEVDF FAERNKPTVK TESSHAETSA ACREFNVNTG LQLVTANTGS DESTVDDGVS  120
YDVEDKRAKI ELAHLQVELE RMNTENQRLK GMLTQVNENY SALQMHFMAL MQHQQNSTTD  180
STKQNQIVER KSEEKKLAIV PRQLLDLGVG GCGDDLMTEE QSNSLSEERT ISGSPQNNNM  240
ELSRNKRIGR DESPESDSWH RNKTPKLDNP AKPVEQTADA TMRKARVSVR ARSEAPMISD  300
GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA DDRTILITTY EGTHNHPLPP  360
AAMAMASTTS AAASMLLSGS MPSADGLMNP NFLARTILPC SSNMATISAS APFPTVTLDL  420
TQTPTPLQYQ RPPPVQFQLP FPQNFAGAVQ TPAAPQGFGQ GLYNQSKFSG LQMSRAVSSE  480
AAQVQGQSSQ QSFADSLSAA TAAITSDPNF TAALAAAISS IIGGSHQNNA NQSSTTPNNP  540
NVNTSNSNNF PGN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22285361176WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00209DAPTransfer from AT1G62300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849314.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9C5191e-147WRKY6_ARATH; WRKY transcription factor 6
TrEMBLA0A022QIH60.0A0A022QIH6_ERYGU; Uncharacterized protein
STRINGVIT_10s0116g01200.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-111WRKY family protein